Browse Skills — Page 231

prompt-engineering-patterns

benjaminasterA/antigravity-awesome-skills

Master advanced prompt engineering techniques to maximize LLM performance, reliability, and controllability in production. Use when optimizing prompts, improving LLM outputs, or designing productio...

prompt-engineering-patterns

wshobson/agents

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prompt-engineering-patterns-v2

diegosouzapw/awesome-omni-skills

Prompt Engineering Patterns workflow skill. Use this skill when the user needs Master advanced prompt engineering techniques to maximize LLM performance, reliability, and controllability and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.

prompt-engineering-v2

diegosouzapw/awesome-omni-skills

Prompt Engineering Patterns workflow skill. Use this skill when the user needs Expert guide on prompt engineering patterns, best practices, and optimization techniques. Use when user wants to improve prompts, learn prompting strategies, or debug agent behavior and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.

prompt-engineering-v3

diegosouzapw/awesome-omni-skills

Prompt Engineering Patterns workflow skill. Use this skill when the user needs Expert guide on prompt engineering patterns, best practices, and optimization techniques. Use when user wants to improve prompts, learn prompting strategies, or debug agent behavior and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.

prompt-factory

alirezarezvani/claude-code-skill-factory

World-class prompt powerhouse that generates production-ready mega-prompts for any role, industry, and task through intelligent 7-question flow, 69 comprehensive presets across 15 professional domains (technical, business, creative, legal, finance, HR, design, customer, executive, manufacturing, R&D, regulatory, specialized-technical, research, creative-media), multiple output formats (XML/Claude/ChatGPT/Gemini), quality validation gates, and contextual best practices from OpenAI/Anthropic/Google. Supports both core and advanced modes with testing scenarios and prompt variations.

prompt-generator

catlog22/Claude-Code-Workflow

Generate or convert Claude Code prompt files — command orchestrators, skill files, agent role definitions, or style conversion of existing files. Follows GSD-style content separation with built-in quality gates. Triggers on "create command", "new command", "create skill", "new skill", "create agent", "new agent", "convert command", "convert skill", "convert agent", "prompt generator", "优化".

prompt-governance

alirezarezvani/claude-skills

Use when prompts run in production and need versioning, a registry, A/B tests, regression checks or an eval pipeline. Sets up the release process for prompts; single-prompt quality: senior-prompt-engineer.

prompt-guard

Orchestra-Research/AI-Research-SKILLs

Meta's 86M prompt injection and jailbreak detector. Filters malicious prompts and third-party data for LLM apps. 99%+ TPR, <1% FPR. Fast (<2ms GPU). Multilingual (8 languages). Deploy with HuggingFace or batch processing for RAG security.

prompt-improver

existential-birds/beagle

Optimize prompts for code-related tasks following prompt-engineering best practices. Use when refining prompts for implementation, debugging, refactoring, code review, or testing.

prompt-injection

wgpsec/AboutSecurity

AI/LLM 间接 Prompt 注入攻击。当目标 AI 系统会处理外部数据源（网页、文档、邮件、数据库、API 返回）时使用。覆盖间接注入、工具链劫持、RAG 投毒、数据外泄等技术。OWASP LLM Top 10 #1 漏洞类别

prompt-jailbreak

wgpsec/AboutSecurity

AI/LLM Prompt 越狱技术。当目标系统包含 AI 聊天机器人、AI Agent 或任何基于 LLM 的对话系统时使用。覆盖角色扮演、编码绕过、多语言切换、上下文窗口攻击、逻辑链递进、系统提示覆盖等越狱方法

prompt-leak

wgpsec/AboutSecurity

AI/LLM 系统提示词泄露技术。当目标是基于 LLM 的应用且想获取其系统提示词、配置信息、工具列表、知识库内容时使用。AI Bug Bounty、红队评估、竞品分析的关键第一步

prompt-library

benjaminasterA/antigravity-awesome-skills

Curated collection of high-quality prompts for various use cases. Includes role-based prompts, task-specific templates, and prompt refinement techniques. Use when user needs prompt templates, role-...

prompt-library-v2

diegosouzapw/awesome-omni-skills

\ud83d\udcdd Prompt Library workflow skill. Use this skill when the user needs A comprehensive collection of battle-tested prompts inspired by awesome-chatgpt-prompts and community best practices and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.

prompt-mirror

github/lever

Mine your own local Copilot session history and return a scorecard of how you direct agents, plus three suggestions illustrated with your own before/after messages. It reads your private history, so it runs only on `/lever mirror` or an explicit ask ("how am I prompting?", "coach me", "mine my sessions", "what do I keep repeating?", a weekly self-retro).

prompt-optimizer

affaan-m/ECC

>-

prompt-optimizer

github/awesome-copilot

Turn any rough prompt, half-formed idea, or task description into a finished, ready-to-send prompt optimized for any LLM model inside a chat interface — NOT the API. Use this skill whenever the user wants to write, rewrite, optimize, improve, sharpen, or polish a prompt for chat. Trigger phrases include "rewrite this prompt", "make this a better prompt", "optimize this prompt", "turn this into a prompt", "help me prompt this", "draft a prompt that...", "I want to ask...", or whenever the user pastes a draft prompt and asks for improvements. Also trigger when the user describes a task they plan to send to an LLM model and clearly wants a reusable, well-structured prompt rather than a direct answer. The output is always a single, copy-pasteable prompt in a code block that the user sends as-is — never a template with placeholders.

prompt-pack

nelsonwerd/idea-to-ship-skills

>-

prompt-templates

datadrivenconstruction/DDC_Skills_for_AI_Agents_in_Construction

Reusable prompt templates for construction AI tasks: cost estimation, schedule analysis, document processing, BIM queries. Structured prompts for consistent results.

prompt-test

indranilbanerjee/digital-marketing-pro

A/B test content variations. Use when: comparing quality scores across prompt approaches, headline styles, or content versions.

prompt-tester

TerminalSkills/skills

>-

prompt-token-efficiency

github/gh-aw

Rewrite prompts for minimal tokens, maximal clarity, and low ambiguity for LLM consumption.

prompt-translator

cclank/lanshu-awesome-ai-video-kit

把一条 AI 视频提示词从源模型(如 Sora 2)的写法风格转换为目标模型(如 Kling 3.0 / Wan 2.7 / Veo 3.1 等)的最佳实践写法。基于 110 条 10 场景 × 11 模型对照基准数据(prompts/data/cross-model-matrix.json),不是凭直觉重写,而是查表式 in-context learning。10 场景:产品 / 双人对话 / 物理动作 / 图生视频 / 多人会议 / 恐怖 / 自然延时 / 抽象 / 武侠 / 萌宠。用于"Sora 已 EOL 帮我把这条提示词改成 Veo"、"我有 Kling 提示词想跑 Wan"、"跨模型 A/B 测试"、"把英文 prompt 优化成 Kling 中文版"等触发场景。

prompt-versionierung

Klotzkette/claude-fuer-deutsches-recht

Versioniert alle Spalten- und Zeilenprompts mit semantischer Versions-ID — patch fuer Wortlautfeinheiten minor fuer geaenderte Antworttypen oder Ampelregeln major fuer geaenderte Pruefdimension. Jede Zelle im Wuerfel traegt die Prompt-Version zum Zeitpunkt der Befuellung. Bei Prompt-Aenderung schlaegt der Skill vor welche Zellen invalidiert und neu zu berechnen sind (siehe `caching-und-teil-rerun`). Sicherheitsnetz gegen `schleichende` Spaltenanderungen. Erzeugt `prompt-historie.yaml` und `aktive-prompts.yaml`.

promptfoo

TerminalSkills/skills

>-

promptfoo-evaluation

daymade/claude-code-skills

Configures and runs LLM evaluation using Promptfoo framework. Use when setting up prompt testing, creating evaluation configs (promptfooconfig.yaml), writing Python custom assertions, implementing llm-rubric for LLM-as-judge, or managing few-shot examples in prompts. Triggers on keywords like "promptfoo", "eval", "LLM evaluation", "prompt testing", or "model comparison".

promptguard

mturac/promptguard

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promptify

mkurman/zorai

Transform user requests into detailed, precise prompts for AI models. Use when users say "promptify", "promptify this", or explicitly request prompt engineering or improvement of their request for better AI responses.

prompting-leitfaden

Klotzkette/claude-fuer-deutsches-recht

Vier-Elemente-Methode für effektives Prompten in der juristischen Praxis: Zielformulierung, Ausgabeformat, Hintergrundwissen und Beispiel; plus Tipps zu Rollenanweisung, Schritt-fuer-Schritt-Methode, Iteration und Zitate-Verifikation.

prompts-chat

TerminalSkills/skills

>-

promql-cli

samber/cc-skills

CLI for querying Prometheus and PromQL-compatible engines (Thanos, Cortex, VictoriaMetrics, Grafana Mimir, Grafana Tempo...) — instant queries, range queries, metric discovery (metrics/labels/meta subcommands), output formats (table/csv/json/graph). Apply when executing PromQL queries, troubleshooting performance issues on a software having observability, investigating latency/error rates/saturation, or analyzing time series data.

pronunciation-specialist

bitwize-music-studio/claude-ai-music-skills

Scans lyrics for pronunciation risks and prevents Suno mispronunciations. Use when writing lyrics with proper nouns, technical terms, homographs, or non-English words.

proof

fredrikaverpil/dotfiles

Provide proof to your claim(s)

proof-checker

wanshuiyin/Auto-claude-code-research-in-sleep

Rigorous mathematical proof verification and fixing workflow. Reads a LaTeX proof, identifies gaps via cross-model review (external reviewer backend, xhigh reasoning), fixes each gap with full derivations, re-reviews, and generates an audit report. Use when user says "检查证明", "verify proof", "proof check", "审证明", "check this proof", or wants rigorous mathematical verification of a theory paper.

proof-of-work

TheBushidoCollective/han

Use automatically during development workflows when making claims about tests, builds, verification, or code quality requiring concrete evidence to ensure trust through transparency.

proof-point-packager

aaron-he-zhu/aaron-marketing-skills

Use when the user asks to "package our proof points", "build reusable stat cards and case snippets", or "put proof where each pillar makes its claim"; turns claims-ledger-approved proofs into reusable proof modules — stat cards, case snippets, testimonial blocks, comparison proofs — each pinned to a message-house pillar and the ledger claim ID it substantiates, and flags any pillar making a claim with no approved proof behind it. Never adjudicates a proof: unverified or ledger-absent proofs are marked ''[needs source]'' and routed to the claims candidates. Not for adjudicating or substantiating claims — use offer-claims-registry; not for fabricating a benchmark to fill a gap — a missing proof is flagged, not invented; not for scoring narrative quality — use narrative-quality-auditor. 证据模块/证据卡/客户案例/主张对齐

proof-techniques

Tibsfox/gsd-skill-creator

Proof writing and verification techniques for mathematical reasoning. Covers 13 proof strategies with canonical worked examples — direct, contrapositive, contradiction, cases, WLOG, vacuous/trivial, biconditional, counterexample, existence (constructive and non-constructive), uniqueness, induction (weak, strong, structural), pigeonhole/double-counting, and diagonal argument/invariants. Use when writing, verifying, or selecting proof strategies for any mathematical claim.

proof-writer

wanshuiyin/Auto-claude-code-research-in-sleep

Writes rigorous mathematical proofs for ML/AI theory. Use when asked to prove a theorem, lemma, proposition, or corollary, fill in missing proof steps, formalize a proof sketch, 补全证明, 写证明, 证明某个命题, or determine whether a claimed proof can actually be completed under the stated assumptions.

proofly-automation

ComposioHQ/awesome-claude-skills

"Automate Proofly tasks via Rube MCP (Composio). Always search tools first for current schemas."

proofread-markdown

flutter/website

Proofreads Markdown files against Google guidelines.

prop-artist

arjun988/blender-skills

Everyday and hero prop modeling for furniture, tools, household objects, kitbash parts, and readable game props. Use when hard-surface is too sci-fi/mechanical and the asset is a grounded prop.

propagate-design-change

striderZA/OpenCodeGameStudios

When a GDD is revised, scans all ADRs and the traceability index to identify which architectural decisions are now potentially stale. Produces a change impact report and guides the user through resolution.

property-based-testing

trailofbits/skills

Writes, reviews, and debugs property-based tests — Hypothesis, fast-check, proptest, jqwik, rapid, and Echidna or Medusa for Solidity invariants. Use whenever tests should cover a whole input domain instead of a hand-picked list of examples: encode/decode and serialize/deserialize pairs, parsers, canonicalizers and normalizers, validators, numeric and Decimal types, comparators and sort order, data structures, and smart-contract state invariants. Also use when adding cases to an existing @given, fast-check, or proptest suite, when judging whether existing property tests assert anything real, and when a generator has shrunk a counterexample and you need to tell a wrong property from a genuine bug. Not for coverage-guided binary fuzzing (libFuzzer, AFL), mutation-testing campaigns, static analysis, benchmarking, or end-to-end UI tests.

property-patterns

microsoft/testfx

Diagnose and fix concrete MSBuild property defects in projects and existing shared-file hierarchies. USE FOR: conditions, defaults, append versus overwrite, last-write-wins values, OS/TFM checks, portable paths, normalization, and reviews centered on those property defects. Property defects in Directory.Build.* remain in scope, including overwritten values across parent/child imports and conditions that run before TargetFramework is set, even when the fix changes import order or moves a property group to .targets. DO NOT USE FOR: placement-only or import-only requests with no concrete property defect, such as discovering shared files or choosing which file owns a target or customization (use directory-build-organization); item operations; target structure; broad reviews without a concrete property defect; non-MSBuild work.

prophet

mkurman/zorai

Meta Prophet — forecasting at scale. Additive model with yearly/weekly/daily seasonality, holiday effects, changepoints, and trend decomposition. Handles missing data and outliers automatically.

proposal

Chorus-AIDLC/Chorus

Chorus Proposal workflow — create proposals with document & task drafts, manage DAG, submit for review.

proposal-builder

anthropics/knowledge-work-plugins

>

proposal-chorus

Chorus-AIDLC/Chorus

Chorus Proposal workflow — create proposals with document and task drafts, manage dependency DAG, validate and submit for review.

proposal-draft

Significant-Gravitas/skills-catalog

Draft a customer proposal from verified needs, approved capabilities, scoped outcomes, evidence, and visible open decisions.

proposal-generation

mkurman/zorai

When a founder needs to create a sales proposal, statement of work, contract, NDA, or master service agreement. Activate when the user mentions proposal, SOW, quote, contract, NDA, MSA, or needs to formalize a deal.

proposal-quality-check

Significant-Gravitas/skills-catalog

Check a proposal or SOW draft for source support, scope clarity, internal consistency, approval gaps, and unsafe commitments.

proposal-writer

mohitagw15856/pm-claude-skills

Write a structured sales proposal or commercial proposal for any deal. Use when asked to write a proposal, sales proposal, commercial proposal, statement of work, or quote document. Produces a complete proposal with problem statement, solution, investment, and next steps.

proposal-writing

mkurman/zorai

>

propose-counterfactual

lyndonkl/claude

Produces the counterfactual framing in an Intuition Builder 5-set — "what if this component were not here?" Reveals the function of a technical element by subtracting it and observing what breaks. Uses Pearl's causal ladder (counterfactual = level 3) as the theoretical spine. Use as the 5th archetype slot of generate-analogy-set, or invoked standalone when the writer wants to build intuition for why a specific element exists. Trigger keywords: counterfactual, what if not, remove, subtract, reveal function, why does this exist.

propose-mitigations

yogsoth-ai/de-anthropocentric-research-engine

Propose concrete mitigation strategies for severe obstacles. MUST use search tools to validate that proposed mitigations are realistic — no armchair theorizing. Each mitigation must have evidence of feasibility.

propose-section

lyndonkl/claude

Converts one candidate cluster from cluster-corpus-by-theme into a named, promised section proposal ready for writer review. Calls write-section-promise for the one-sentence promise. Rates fit confidence (high / medium / low / provisional) and flags borderline posts. Use once per cluster that passes ≥3-post threshold. Trigger keywords: propose section, section proposal, new section candidate.

propose-security-hardening

openai/codex-security

Develop evidence-backed structural security hardening proposals from disclosures, findings, source code, or Codex Security scans. Use for systemic improvements, alternatives beyond individual patches, architectural tradeoffs, or implementation planning. Also use when a top-level scan requests final-report hardening guidance.

proposing-a-change

microsoft/amplifier-bundle-converge

>

propositional-logic

Tibsfox/gsd-skill-creator

The logic of sentential connectives -- and, or, not, if-then, if-and-only-if -- as a formal system. Covers syntax (well-formed formulas), semantics (truth tables), satisfiability, validity, logical equivalence, normal forms (CNF, DNF), natural-deduction rules, and common translation pitfalls. Use when formalizing arguments with propositional structure, checking validity mechanically, or teaching the foundations of formal reasoning.

proptech-advisor

borghei/Claude-Skills

>

prose

cloudflare/computer

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prose

openclaw/openclaw

OpenProse VM skill pack. Activate on any `prose` command, .prose files, or OpenProse mentions; orchestrates multi-agent workflows.

prospect

superagi/skills

Find and filter prospect leads and companies, enrich data, and track buying signals in SuperAGI Sales

prospect

anthropics/knowledge-work-plugins

"Full ICP-to-leads pipeline. Describe your ideal customer in plain English and get a ranked table of enriched decision-maker leads with emails and phone numbers."

prospect-intake

anthropics/claude-for-financial-advisors

Start a new prospect's intake, with or without their files in hand — a request naming a new prospect and attaching no documents is a normal starting point, because Step 1 searches the connected tools or asks the advisor to upload. Cleans and normalizes their account files (statements, exports, screenshots) into a consolidated view, then hands back a plain-English prospect summary, a detailed analyst handoff the full proposal gets built from, and a friendly "what to expect" memo, offered as an email draft on approval. Does not produce the proposal, recommend an allocation, or quote fees. Triggers on "prospect intake", "/prospect-intake", "new prospect intake", "clean up [prospect]'s statements", "process [prospect]'s files", "what to expect note for [prospect]" — and on how an advisor raises a new prospect before any file exists: "I met with a potential client/customer", "[name] is interested in becoming a client", "I have a new prospect", "how should I proceed with [name]".

prospect-panel-simulator

OneWave-AI/claude-skills

Simulate a panel of your real prospects and buyers to pressure-test sales and marketing before it goes out — cold emails, pitch decks, landing pages, pricing pages, demo scripts, proposals. Each simulated prospect reacts in character, raises the objection they'd actually raise, and tells you whether they'd reply, book, or ghost. Use to de-risk outbound and messaging without burning real leads.

prospect-research-compiler

OneWave-AI/claude-skills

Aggregate prospect intelligence from multiple sources including news, social media, company websites, and financial data.

prospecting

Significant-Gravitas/skills-catalog

When the user wants to find, qualify, and build a list of prospects to reach out to — across B2B SaaS, general B2B, or local small businesses. Also use when the user mentions "prospecting," "build a prospect list," "find prospects," "find leads," "lead gen list," "find SaaS companies that," "find B2B companies," "find local businesses," "ICP-fit accounts," "who should we go after," "outbound list," "target account list," "find clients near me," "businesses without websites," "prospect research," "qualified leads," "find my first customers," "early adopters," "design partners," "beta users," or "who has this problem." Use this for the list-building and qualification phase. For writing the outbound copy after the list is built, see cold-email. For deep competitive research on specific accounts, see competitor-profiling.

prospecting

coreyhaines31/marketingskills

When the user wants to find, qualify, and build a list of prospects to reach out to, across B2B SaaS, general B2B, or local small businesses. Also use when the user mentions "prospecting," "build a prospect list," "find leads," "lead list," "outbound list," "target account list," "ICP-fit accounts," "find local businesses," "find my first customers," "design partners," "signal-based outbound," "gap plays," "buying signals," "intent data," "job change alerts," "waterfall enrichment," "Clay table," "lookalike accounts," "catch-all emails," "account tiering," or "research this account before I reach out." Always verify emails before they reach a sequence, and never scrape LinkedIn. Define audiences in Sales Navigator and pull contacts from licensed data. Covers list building, signals, enrichment, verification, and account research. For the outreach itself (copy, sending setup, LinkedIn, cadences, replies), see cold-email. For researching competitors, see competitor-profiling.

prospecting-research

guia-matthieu/clawfu-skills

Conduct deep account and contact research to personalize outreach and identify compelling angles for engagement

prospective-hindsight

yogsoth-ai/de-anthropocentric-research-engine

Strategy: Klein pre-mortem — assume the artifact has failed, then retrospect plausible causes. Generates rapid failure scenario catalog.

prospero-registration-helper

aipoch/medical-research-skills

Assists researchers in generating PROSPERO registration content for meta-analyses from a title and optional protocol. Use when the user wants to draft a PROSPERO registration form.

protect-mcp-governance

diegosouzapw/awesome-omni-skills

MCP Agent Governance with protect-mcp workflow skill. Use this skill when the user needs Agent governance skill for MCP tool calls \u2014 Cedar policy authoring, shadow-to-enforce rollout, and Ed25519 receipt verification and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.

protect-mcp-governance-v2

diegosouzapw/awesome-omni-skills

MCP Agent Governance with protect-mcp workflow skill. Use this skill when the user needs Agent governance skill for MCP tool calls \u2014 Cedar policy authoring, shadow-to-enforce rollout, and Ed25519 receipt verification and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.

protect-mcp-setup

wshobson/agents

Configure Cedar policy enforcement and Ed25519 signed receipts for Claude Code tool calls. Use when setting up projects that need cryptographic audit trails, policy-gated tool execution, or compliance-ready evidence of agent actions.

protected-vercel-deployments

vercel-labs/agent-browser

Access and test Vercel deployments protected by Vercel Authentication, SSO, or Deployment Protection with agent-browser. Use when a preview or production URL redirects to a Vercel login page, returns a protection 401 or 403, or needs short-lived Trusted Sources OIDC authentication instead of a static bypass secret or public exception.

protein_classification_analysis

InternScience/scp

Protein Classification Analysis - Classify protein: ChEMBL protein classification, UniProt entry, InterPro domains, and Ensembl biotypes. Use this skill for protein science tasks involving search protein classification get uniprotkb entry by accession query interpro get info biotypes. Combines 4 tools from 4 SCP server(s).

protein_complex_analysis

InternScience/scp

Protein Complex Visualization & Analysis - Analyze protein complex: download structure, visualize complex, extract chains, and calculate quality metrics. Use this skill for structural biology tasks involving retrieve protein data by pdbcode visualize complex extract pdb chains calculate pdb basic info. Combines 4 tools from 1 SCP server(s).

protein_database_crossref

InternScience/scp

Protein Cross-Database Reference - Cross-reference protein: UniProt entry, NCBI gene, Ensembl xrefs, and PDB structure search. Use this skill for proteomics tasks involving get uniprotkb entry by accession get gene metadata by gene name get xrefs symbol retrieve protein data by pdbcode. Combines 4 tools from 4 SCP server(s).

protein_drug_interaction

InternScience/scp

Protein-Drug Interaction Profiling - Profile protein-drug interactions: protein properties, drug structure, binding affinity prediction, and interaction data. Use this skill for molecular pharmacology tasks involving calculate protein sequence properties ChemicalStructureAnalyzer boltz binding affinity PredictDrugTargetInteraction. Combines 4 tools from 4 SCP server(s).

protein_engineering

InternScience/scp

Protein Engineering Workflow - Engineer a protein: predict structure, identify functional residues, predict beneficial mutations, and calculate properties. Use this skill for protein engineering tasks involving Protein structure prediction ESMFold predict functional residue zero shot sequence prediction calculate protein sequence properties. Combines 4 tools from 2 SCP server(s).

protein_function_annotation

InternScience/scp

Protein Function Annotation Pipeline - Annotate protein function: UniProt metadata, InterPro domains, functional prediction, and GO enrichment. Use this skill for proteomics tasks involving query uniprot query interpro predict protein function get functional enrichment. Combines 4 tools from 2 SCP server(s).

protein_interaction_network

InternScience/scp

Protein Interaction Network Analysis - Build protein interaction network: map identifiers with STRING, get PPI network, compute enrichment, and link to KEGG pathways. Use this skill for systems biology tasks involving mapping identifiers get string network interaction get ppi enrichment kegg link. Combines 4 tools from 2 SCP server(s).

protein_property_comparison

InternScience/scp

Cross-Species Protein Comparison - Compare proteins across species: get orthologs from NCBI, compute properties for each, and compare similarity. Use this skill for comparative biology tasks involving get gene orthologs calculate protein sequence properties calculate smiles similarity get homology id. Combines 4 tools from 3 SCP server(s).

protein_quality_assessment

InternScience/scp

Protein Structure Quality Assessment - Assess structure quality: basic info, geometry analysis, quality metrics, composition, and visualization. Use this skill for structural biology tasks involving calculate pdb basic info calculate pdb structural geometry calculate pdb quality metrics calculate pdb composition info visualize protein. Combines 5 tools from 1 SCP server(s).

protein_similarity_search

InternScience/scp

Protein Similarity Search - Search for similar proteins: extract sequence from PDB, search structures with FoldSeek, find homologs with STRING, and check UniProt. Use this skill for bioinformatics tasks involving extract pdb sequence foldseek search get best similarity hits between species search uniprotkb entries. Combines 4 tools from 3 SCP server(s).

protein_solubility_optimization

InternScience/scp

Protein Solubility Optimization - Optimize protein solubility: calculate properties, predict solubility, predict hydrophilicity, and suggest mutations. Use this skill for protein engineering tasks involving calculate protein sequence properties predict protein function ComputeHydrophilicity zero shot sequence prediction. Combines 4 tools from 3 SCP server(s).

protein_structure_analysis

InternScience/scp

Protein Structure Comprehensive Analysis - Comprehensive structure analysis: download PDB, extract chains, calculate geometry, quality metrics, and composition. Use this skill for structural biology tasks involving retrieve protein data by pdbcode extract pdb chains calculate pdb structural geometry calculate pdb quality metrics calculate pdb composition info. Combines 5 tools from 1 SCP server(s).

protein-blast-search

InternScience/scp

Search for similar protein sequences in UniProt Swiss-Prot database using BLAST to identify homologous proteins and functional relationships.

protein-design-workflow

adaptyvbio/protein-design-skills

>

protein-interaction-network-analysis

swaruplab/operon

Analyze protein-protein interaction networks using STRING, BioGRID, and SASBDB databases. Maps protein identifiers, retrieves interaction networks with confidence scores, performs functional enrichment analysis (GO/KEGG/Reactome), and optionally includes structural data. No API key required for core functionality (STRING). Use when analyzing protein networks, discovering interaction partners, identifying functional modules, or studying protein complexes.

protein-properties-calculation

InternScience/scp

Calculate comprehensive protein sequence properties including isoelectric point, molecular weight, hydrophobicity, and physicochemical parameters.

protein-qc

adaptyvbio/protein-design-skills

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protein-structure-prediction

swaruplab/operon

Predicts 3D protein structures from amino acid sequences using ESMFold or AlphaFold3 (mock).

proteinmpnn

adaptyvbio/protein-design-skills

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protenix

adaptyvbio/protein-design-skills

>

proteome_analysis

InternScience/scp

Proteome-Level Analysis - Analyze at proteome level: get proteome from UniProt, gene-centric view, functional annotation from STRING. Use this skill for proteomics tasks involving get proteome by id get gene centric by proteome get functional annotation. Combines 3 tools from 2 SCP server(s).

proteomexchange-skill

openai/plugins

Submit compact ProteomeXchange PROXI requests for datasets, libraries, peptidoforms, proteins, PSMs, spectra, and USI examples. Use when a user wants concise PROXI summaries

proteomics-data-import

swaruplab/operon

Load and parse mass spectrometry data formats including mzML, mzXML, and quantification tool outputs like MaxQuant proteinGroups.txt. Use when starting a proteomics analysis with raw or processed MS data. Handles contaminant filtering and missing value assessment.